Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TRPT1 ENSSSCG00000013040

.

Description

tRNA phosphotransferase 1 [Source:VGNC Symbol;Acc:VGNC:94472]

Location

Primary_assembly 2: 7,883,945-7,888,133 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 3 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000014253.5	TRPT1-203	2345	261aa	ENSSSCP00000013867.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RQ02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000106730.1	TRPT1-202	2223	188aa	ENSSSCP00000081098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FPH7	-
ENSSSCT00000100672.1	TRPT1-201	800	167aa	ENSSSCP00000078632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FHB8	-

.

Summary

.

.