Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSSSCG00000011121

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Description

CUGBP Elav-like family member 2 [Source:VGNC Symbol;Acc:VGNC:95461]

Location

Primary_assembly 10: 60,506,504-61,084,960 reverse strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 8 transcripts (splice variants), 280 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040633.3	-	4058	548aa	ENSSSCP00000033888.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQK4 A0A8D1G5I8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000059882.3	-	4158	533aa	ENSSSCP00000036848.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZZF1 A0A8D2A3W3	-
ENSSSCT00000054037.3	-	4127	520aa	ENSSSCP00000035873.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480M5I2 A0A8D1SJM4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000096261.1	-	3411	278aa	ENSSSCP00000080662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FP16	-
ENSSSCT00000051735.2	-	2582	515aa	ENSSSCP00000058410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BQM0 A0A8D0SBE9	-
ENSSSCT00000012171.5	-	2568	514aa	ENSSSCP00000011861.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D2A6W0 F1RUN0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000060918.3	-	2037	439aa	ENSSSCP00000039904.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A7Q1	-
ENSSSCT00000091969.1	-	1682	440aa	ENSSSCP00000076499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1SVI7 A0A8W4FB02	-

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Summary

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