Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PDCD4 ENSSSCG00000010627

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Description

programmed cell death 4 [Source:VGNC Symbol;Acc:VGNC:91244]

Location

Primary_assembly 14: 121,305,629-121,338,740 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 8 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000041632.2	PDCD4-204	2230	469aa	ENSSSCP00000044229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TF35 A0A4X1TG29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000051692.3	PDCD4-203	6040	464aa	ENSSSCP00000058733.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0XM80 A0A8D1T1I2	-
ENSSSCT00000011623.5	PDCD4-202	6028	460aa	ENSSSCP00000011321.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S5L7	-
ENSSSCT00000082905.2	PDCD4-205	6022	458aa	ENSSSCP00000068693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TF83 A0A5G2QV27	-
ENSSSCT00000067945.2	PDCD4-201	5974	442aa	ENSSSCP00000072208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0IJ44 A0A8D0XIM9	-
ENSSSCT00000085252.1	PDCD4-207	2139	457aa	ENSSSCP00000074305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RNB8 A0A8D0T0V8	-
ENSSSCT00000063953.1	PDCD4-206	2034	410aa	ENSSSCP00000051777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TDX8 A0A8D0T135	-
ENSSSCT00000082647.1	PDCD4-208	1954	395aa	ENSSSCP00000067048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQN3 A0A8D0IC73	-

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Summary

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