Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: P4HA1 ENSSSCG00000010292

.

Description

prolyl 4-hydroxylase subunit alpha 1 [Source:VGNC Symbol;Acc:VGNC:91132]

Location

Primary_assembly 14: 75,825,148-75,919,016 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 6 transcripts (splice variants), 200 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000043393.3	P4HA1-205	4792	534aa	ENSSSCP00000035425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZUW5 A0A4X1T726	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSSSCT00000011264.4	P4HA1-206	4738	516aa	ENSSSCP00000010972.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T740 F6QB76	-
ENSSSCT00000083723.1	P4HA1-203	3264	534aa	ENSSSCP00000067406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T5S7 A1X898	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000070036.2	P4HA1-204	3180	506aa	ENSSSCP00000072945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R790 A0A8D1U6P6	-
ENSSSCT00000091415.2	P4HA1-202	2767	511aa	ENSSSCP00000061833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QBH8 A0A8D0V2L1	-
ENSSSCT00000081963.1	P4HA1-201	1883	485aa	ENSSSCP00000060067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QP57 A0A8D0TKX0	-

.

Summary

.

.