Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RBM46 ENSSSCG00000008994

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Description

RNA binding motif protein 46 [Source:VGNC Symbol;Acc:VGNC:92157]

Location

Primary_assembly 8: 74,337,319-74,382,515 reverse strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040938.3	RBM46-203	2564	533aa	ENSSSCP00000057258.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1ST16 A0A8D0K456	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000054765.3	RBM46-202	4416	485aa	ENSSSCP00000045316.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AN41 A0A8D0Z7G5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000070782.2	RBM46-201	2617	470aa	ENSSSCP00000061027.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SUE3 A0A8D0NZ73	-

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Summary

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