Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RANBP2 ENSSSCG00000008136

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Description

RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]

Location

Primary_assembly 3: 47,531,359-47,601,495 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 6 transcripts (splice variants), 226 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000031443.4	RANBP2-202	10707	3233aa	ENSSSCP00000024971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1PQR1 I3LLK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000008913.5	RANBP2-205	10629	3207aa	ENSSSCP00000008687.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1D5J8 F1SU29	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000054743.3	RANBP2-204	10566	3186aa	ENSSSCP00000044710.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ALC2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000062431.3	RANBP2-203	10536	3176aa	ENSSSCP00000059494.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BSJ6 A0A8D1KPU3	-
ENSSSCT00000054576.3	RANBP2-206	4691	1503aa	ENSSSCP00000059202.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BST4	-
ENSSSCT00000093378.1	RANBP2-201	419	51aa	ENSSSCP00000075759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W111 A0A5G2R821	-

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Summary

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