Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DNAJC17 ENSSSCG00000004762

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Description

DnaJ heat shock protein family (Hsp40) member C17 [Source:VGNC Symbol;Acc:VGNC:103082]

Location

Primary_assembly 1: 130,516,779-130,559,234 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 4 transcripts (splice variants), 217 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000057777.2	DNAJC17-204	4001	309aa	ENSSSCP00000043231.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1HHR6 A0A8D1VQ90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000060746.3	DNAJC17-201	6063	308aa	ENSSSCP00000044705.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ALB8 A0A8D1MNE6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000005261.3	DNAJC17-203	941	278aa	ENSSSCP00000005134.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1AQC1 F1SST1	-
ENSSSCT00000057818.3	DNAJC17-202	852	246aa	ENSSSCP00000033954.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UR25 A0A8D1AWQ9	-

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Summary

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