Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZC3H4 ENSSSCG00000003110

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Description

zinc finger CCCH-type containing 4 [Source:VGNC Symbol;Acc:VGNC:95097]

Location

Primary_assembly 6: 52,894,951-52,938,164 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 4 transcripts (splice variants), 196 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000088705.2	ZC3H4-204	6771	1249aa	ENSSSCP00000073512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RFE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000081236.2	ZC3H4-203	6607	1248aa	ENSSSCP00000060483.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQC3	-
ENSSSCT00000003449.5	ZC3H4-202	4660	1165aa	ENSSSCP00000003366.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RM04	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000096710.1	ZC3H4-201	4163	1053aa	ENSSSCP00000078847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FHD8	-

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Summary

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