Rho guanine nucleotide exchange factor 1 [Source:VGNC Symbol;Acc:VGNC:96922]
Primary_assembly 6: 49,975,876-49,995,339 reverse strand.
Sscrofa11.1:CM000817.5
This gene has 9 transcripts (splice variants), 198 orthologues and 8 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000045918.3 | ARHGEF1-207 | 4092 | 1181aa | ENSSSCP00000044252.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AJS0 A0A4X1SG16 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000077931.2 | ARHGEF1-201 | 5383 | 968aa | ENSSSCP00000067657.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QS77 A0A8D1NFL4 | - |
| ENSSSCT00000076130.2 | ARHGEF1-202 | 5383 | 968aa | ENSSSCP00000060554.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QAW6 A0A8D0TNE9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000041398.3 | ARHGEF1-208 | 4096 | 1180aa | ENSSSCP00000040702.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AA62 | - |
| ENSSSCT00000045905.3 | ARHGEF1-209 | 3919 | 1121aa | ENSSSCP00000042573.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AFF7 A0A8D1XBZ8 | - |
| ENSSSCT00000066326.3 | ARHGEF1-206 | 3639 | 972aa | ENSSSCP00000032827.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZMZ3 A0A4X1SGQ3 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSSSCT00000050245.3 | ARHGEF1-203 | 3463 | 943aa | ENSSSCP00000033583.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZQ45 A0A4X1SGS7 | - |
| ENSSSCT00000042668.3 | ARHGEF1-204 | 3278 | 880aa | ENSSSCP00000053703.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BC94 A0A8D1JFH2 | - |
| ENSSSCT00000003377.5 | ARHGEF1-205 | 3269 | 877aa | ENSSSCP00000003294.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1RGG2 | - |
