Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CHD8 ENSSSCG00000002127

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Description

chromodomain helicase DNA binding protein 8 [Source:VGNC Symbol;Acc:VGNC:86634]

Location

Primary_assembly 7: 77,719,582-77,780,146 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 2 transcripts (splice variants), 201 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000056768.2	CHD8-201	8389	2583aa	ENSSSCP00000035899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UY74 A0A8D0J4L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000052517.3	CHD8-202	7418	2303aa	ENSSSCP00000057845.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BN32	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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