Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CDH13 ENSSSCG00000002684

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Description

cadherin 13 [Source:NCBI gene (formerly Entrezgene);Acc:100126163]

Location

Primary_assembly 6: 4,808,255-5,832,415 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000079769.2	CDH13-203	2316	771aa	ENSSSCP00000060063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0JU15 A0A8D0USM9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000075565.2	CDH13-202	3593	674aa	ENSSSCP00000061692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T2W2 A0A8D0ZXF7	-
ENSSSCT00000002977.5	CDH13-201	3592	713aa	ENSSSCP00000002898.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1FMU5 A8D737	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000084036.2	CDH13-205	2779	747aa	ENSSSCP00000060682.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QF74 A0A8D1CU19	-
ENSSSCT00000088987.2	CDH13-206	1950	649aa	ENSSSCP00000061878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1CF26 A0A8D1YT31	-
ENSSSCT00000080811.2	CDH13-204	570	189aa	ENSSSCP00000060262.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPP8	-

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Summary

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