Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RCC1 ENSSSCG00000029097

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Description

regulator of chromosome condensation 1 [Source:VGNC Symbol;Acc:VGNC:92175]

Location

Primary_assembly 6: 85,546,024-85,565,866 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 4 transcripts (splice variants), 218 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039135.3	RCC1-203	1643	443aa	ENSSSCP00000055912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BHA3 A0A8D0Q5I1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000093532.1	RCC1-204	4051	429aa	ENSSSCP00000080094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FL78	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000028011.4	RCC1-202	2515	427aa	ENSSSCP00000027329.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0Q453 A0A8D1V4X1	-
ENSSSCT00000063001.2	RCC1-201	1435	393aa	ENSSSCP00000031210.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZI92 A0A8D1PEL7	-

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Gene tree

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