Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PGGT1B ENSSSCG00000014215

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Description

protein geranylgeranyltransferase type I subunit beta [Source:VGNC Symbol;Acc:VGNC:91350]

Location

Primary_assembly 2: 119,383,387-119,440,322 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000103857.1	PGGT1B-202	5271	377aa	ENSSSCP00000078423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U5X3 A0A5G2R1L1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000098118.1	PGGT1B-201	5040	300aa	ENSSSCP00000074694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U0P0 A0A8D0K2Z6	-
ENSSSCT00000015533.4	PGGT1B-203	1825	351aa	ENSSSCP00000015121.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1PYY0 F1RLE8	-

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Gene tree

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