Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CRAT ENSSSCG00000005671

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Description

carnitine O-acetyltransferase [Source:VGNC Symbol;Acc:VGNC:86976]

Location

Primary_assembly 1: 269,386,650-269,401,331 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 8 transcripts (splice variants), 319 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061204.3	CRAT-206	2792	745aa	ENSSSCP00000038068.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A2X3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000039132.2	CRAT-201	5057	644aa	ENSSSCP00000048024.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AVT7	-
ENSSSCT00000084114.2	CRAT-203	5000	625aa	ENSSSCP00000072153.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R4L7	-
ENSSSCT00000060032.3	CRAT-202	4937	604aa	ENSSSCP00000045403.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AMX9	-
ENSSSCT00000052662.3	CRAT-205	2873	626aa	ENSSSCP00000034016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZRC3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000006234.3	CRAT-204	2628	605aa	ENSSSCP00000006075.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RR45	-
ENSSSCT00000076858.2	CRAT-207	2148	715aa	ENSSSCP00000063737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QG61	-
ENSSSCT00000101984.1	CRAT-208	1841	571aa	ENSSSCP00000076996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FFA5	-

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Paralogues

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