Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: PIBF1 ENSSSCG00000024722

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Description

progesterone immunomodulatory binding factor 1 [Source:VGNC Symbol;Acc:VGNC:91414]

Location

Primary_assembly 11: 45,076,062-45,362,887 forward strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 8 transcripts (splice variants) and 215 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000076691.1	PIBF1-208	3469	782aa	ENSSSCP00000067962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QT03 A0A8D1ZRA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000075303.2	PIBF1-203	5561	698aa	ENSSSCP00000060844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QFN3 A0A8D1G820	-
ENSSSCT00000072847.2	PIBF1-207	4751	719aa	ENSSSCP00000070419.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RGQ0 A0A8D0YYY1	-
ENSSSCT00000045708.3	PIBF1-201	4072	231aa	ENSSSCP00000049338.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZL5	-
ENSSSCT00000026633.4	PIBF1-206	3179	757aa	ENSSSCP00000020077.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VDW3 I3L7S0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000046867.3	PIBF1-205	2943	752aa	ENSSSCP00000045143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AMN1	-
ENSSSCT00000025113.3	PIBF1-204	2864	696aa	ENSSSCP00000023269.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1RC34 I3LGS5	-
ENSSSCT00000051035.2	PIBF1-202	2820	778aa	ENSSSCP00000032571.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZLY6 A0A8D1GE54	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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