Transcript: ENSRNOT00000066253.4 Kmt5a-201

Description

lysine methyltransferase 5A [Source:RGD Symbol;Acc:1587560]

Gene Synonyms

LOC689820, Pr-set7, RGD1305893, Setd8

Location

Primary_assembly 12: 37,800,344-37,823,783 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 93 variant alleles and maps to 232 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000064318.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000106064.2	Kmt5a-202	2850	403aa	ENSRNOP00000095821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ANW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000108981.2	Kmt5a-204	3005	396aa	ENSRNOP00000092997.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKG3	-
ENSRNOT00000114055.2	Kmt5a-206	2891	344aa	ENSRNOP00000080894.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQS7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000066253.4	Kmt5a-201	2876	350aa	ENSRNOP00000062763.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZEB9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000106166.2	Kmt5a-203	2831	324aa	ENSRNOP00000084143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZY89	-
ENSRNOT00000111843.2	Kmt5a-205	2831	338aa	ENSRNOP00000088749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5Q1	-
ENSRNOT00000129612.1	Kmt5a-207	2262	339aa	ENSRNOP00000107061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,876 bps, Translation length: 350 residues

Version

ENSRNOT00000066253.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000066253.4 Kmt5a-201

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Transcript: ENSRNOT00000066253.4 Kmt5a-201

Summary

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