Transcript: ENSRNOT00000001404.7 Usp42-201

Description

ubiquitin specific peptidase 42 [Source:RGD Symbol;Acc:1305231]

Gene Synonyms

LOC288482

Location

About this transcript

This transcript has 18 exons, is annotated with 40 domains and features, is associated with 67 variant alleles and maps to 240 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000001404.7	Usp42-201	5187	1325aa	ENSRNOP00000001404.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UH81 D3ZU96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 18, Coding exons: 16, Transcript length: 5,187 bps, Translation length: 1,325 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: D3ZU96

Version

ENSRNOT00000001404.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.