Transcript: ENSRNOT00000012334.8 Col5a1-201

Description

collagen type V alpha 1 chain [Source:RGD Symbol;Acc:70920]

Location

About this transcript

This transcript has 66 exons, is annotated with 59 domains and features, is associated with 461 variant alleles and maps to 424 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000012334.8	Col5a1-201	5546	1840aa	ENSRNOP00000012334.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V763	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000086352.2	Col5a1-202	6289	1788aa	ENSRNOP00000070132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JX47	-
ENSRNOT00000110258.1	Col5a1-203	5632	1808aa	ENSRNOP00000084311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GA68	-

Summary

Statistics

Exons: 66, Coding exons: 66, Transcript length: 5,546 bps, Translation length: 1,840 residues

Version

ENSRNOT00000012334.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.