Transcript: ENSRNOT00000005311.7 Col1a1-201

Description

collagen type I alpha 1 chain [Source:RGD Symbol;Acc:61817]

Gene Synonyms

COLIA1

Location

About this transcript

This transcript has 51 exons, is annotated with 63 domains and features, is associated with 169 variant alleles and maps to 506 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005311.7	Col1a1-201	5825	1453aa	ENSRNOP00000005311.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P02454	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000115180.1	Col1a1-204	5798	1444aa	ENSRNOP00000081946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G8P4	-
ENSRNOT00000114204.1	Col1a1-202	5629	1388aa	ENSRNOP00000088255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GG08	-
ENSRNOT00000115096.1	Col1a1-203	5573	1369aa	ENSRNOP00000081061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRN2	-

Summary

Statistics

Exons: 51, Coding exons: 51, Transcript length: 5,825 bps, Translation length: 1,453 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02454

Version

ENSRNOT00000005311.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.