Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cdh5 ENSRNOG00000013324

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Description

cadherin 5 [Source:RGD Symbol;Acc:1307370]

Gene Synonyms

LOC307618

Location

Primary_assembly 19: 815,411-854,368 reverse strand.

mRatBN7.2:CM026992.1

About this gene

This gene has 2 transcripts (splice variants), 127 orthologues, 33 paralogues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086995.2	Cdh5-202	3991	777aa	ENSRNOP00000071462.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0I6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000017983.7	Cdh5-201	2342	727aa	ENSRNOP00000017983.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M7E5	-

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Summary

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