Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mta1 ENSRNOG00000004711

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Description

metastasis associated 1 [Source:RGD Symbol;Acc:621018]

Location

Primary_assembly 6: 132,178,853-132,217,641 forward strand.

mRatBN7.2:CM026979.1

About this gene

This gene has 7 transcripts (splice variants), 206 orthologues, 5 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112035.1	Mta1-205	2860	742aa	ENSRNOP00000076373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XZU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000109546.1	Mta1-204	4369	732aa	ENSRNOP00000095736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM20	-
ENSRNOT00000115942.1	Mta1-206	4354	733aa	ENSRNOP00000093477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHP2	-
ENSRNOT00000096549.1	Mta1-203	4336	708aa	ENSRNOP00000084698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1S8	-
ENSRNOT00000118557.1	Mta1-207	4318	716aa	ENSRNOP00000080347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPI0	-
ENSRNOT00000006521.7	Mta1-201	2791	719aa	ENSRNOP00000006521.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TA98	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000046456.4	Mta1-202	2639	701aa	ENSRNOP00000051141.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQS1	-

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Summary

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