Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
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Gene: Selplg ENSRNOG00000000699

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Description

selectin P ligand [Source:RGD Symbol;Acc:1307971]

Gene Synonyms

LOC363930, Psgl1, Selpl

Location

Primary_assembly 12: 42,796,580-42,812,585 forward strand.

mRatBN7.2:CM026985.1

About this gene

This gene has 3 transcripts (splice variants), 74 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096864.1	Selplg-202	6321	430aa	ENSRNOP00000082525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4X3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000106044.1	Selplg-203	4794	430aa	ENSRNOP00000086974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4X3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000000888.6	Selplg-201	3578	420aa	ENSRNOP00000000888.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6T9E7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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