Gene: Ccl21 ENSRNOG00000034290

Description

C-C motif chemokine ligand 21 [Source:RGD Symbol;Acc:1311996]

Gene Synonyms

Ccl21b, LOC298006, MGC105669

Location

mRatBN7.2:CM026978.1

About this gene

This gene has 2 transcripts (splice variants), 119 orthologues, 13 paralogues and is associated with 10 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000023951.7	Ccl21-201	861	133aa	ENSRNOP00000023951.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RJN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000117300.1	Ccl21-202	945	122aa	ENSRNOP00000080937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZU27	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary