Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RT1-Db1 ENSRNOG00000033215

.

Description

RT1 class II, locus Db1 [Source:RGD Symbol;Acc:1593282]

Gene Synonyms

Db1, MGC105710, RT1-D beta, RT1-Db, RT1-Db1_mapped, RT1-Db1n

Location

Primary_assembly 20: 4,548,666-4,558,258 reverse strand.

mRatBN7.2:CM026993.1

About this gene

This gene has 5 transcripts (splice variants), 126 orthologues, 11 paralogues and is associated with 136 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000080590.2	RT1-Db1-204	874	268aa	ENSRNOP00000069704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JW17	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000113681.1	RT1-Db1-205	5068	263aa	ENSRNOP00000080217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQ79	-
ENSRNOT00000000522.9	RT1-Db1-201	1270	264aa	ENSRNOP00000000522.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TQA6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000060327.4	RT1-Db1-202	823	251aa	ENSRNOP00000057075.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M7F9	-
ENSRNOT00000080091.2	RT1-Db1-203	280	57aa	ENSRNOP00000091399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEE1	-

.

Summary

.

.