Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Col5a3 ENSRNOG00000020525

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Description

collagen type V alpha 3 chain [Source:RGD Symbol;Acc:70922]

Location

Primary_assembly 8: 19,304,571-19,349,853 reverse strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 1 transcript (splice variant), 86 orthologues, 37 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000027897.5	Col5a3-201	6146	1736aa	ENSRNOP00000027897.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7EVZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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