Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rxra ENSRNOG00000009446

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Description

retinoid X receptor alpha [Source:RGD Symbol;Acc:3610]

Location

Primary_assembly 3: 10,989,832-11,073,712 forward strand.

mRatBN7.2:CM026976.1

About this gene

This gene has 4 transcripts (splice variants), 244 orthologues, 11 paralogues and is associated with 32 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100573.1	Rxra-203	2375	507aa	ENSRNOP00000091257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQ23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000099288.1	Rxra-202	2048	497aa	ENSRNOP00000087257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A846	-
ENSRNOT00000012892.5	Rxra-201	2042	467aa	ENSRNOP00000012892.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VJ96	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000107435.1	Rxra-204	1952	465aa	ENSRNOP00000087600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GFA6	-

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Summary

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