Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Abcb1a ENSRNOG00000008012

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Description

ATP binding cassette subfamily B member 1A [Source:RGD Symbol;Acc:619951]

Gene Synonyms

Abcb1, Mdr1, Mdr1a, Mdr2, Pgy1, Pgy3, mdr1b

Location

Primary_assembly 4: 25,158,362-25,442,709 reverse strand.

mRatBN7.2:CM026977.1

About this gene

This gene has 5 transcripts (splice variants), 148 orthologues, 11 paralogues and is associated with 103 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000011166.6	Abcb1a-201	4068	1286aa	ENSRNOP00000011166.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FKA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000082359.2	Abcb1a-202	4026	1272aa	ENSRNOP00000075278.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JK64	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000096021.1	Abcb1a-203	3869	1248aa	ENSRNOP00000082870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZY39	-
ENSRNOT00000100110.1	Abcb1a-204	3854	1243aa	ENSRNOP00000097760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GMN6	-
ENSRNOT00000101034.1	Abcb1a-205	2251	721aa	ENSRNOP00000077516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y6F1	-

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Summary

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