Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Phactr4 ENSRNOG00000046922

.

Description

phosphatase and actin regulator 4 [Source:RGD Symbol;Acc:1592823]

Gene Synonyms

LOC682920

Location

Primary_assembly 5: 149,833,367-149,905,187 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 6 transcripts (splice variants), 290 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107632.2	Phactr4-203	4948	725aa	ENSRNOP00000095468.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQY6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000153713.1	Phactr4-205	4710	672aa	ENSRNOP00000100258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000111943.2	Phactr4-204	4645	714aa	ENSRNOP00000093257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJP4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105203.2	Phactr4-202	4619	710aa	ENSRNOP00000094116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AZ06	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000153887.1	Phactr4-206	3347	710aa	ENSRNOP00000104328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000074374.5	Phactr4-201	2031	676aa	ENSRNOP00000065513.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R7T1	-

.

Gene tree

.

.