Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Plxna1 ENSRNOG00000017003

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Description

plexin A1 [Source:RGD Symbol;Acc:1560871]

Gene Synonyms

LOC362398, RGD1560871

Location

Primary_assembly 4: 123,297,244-123,340,428 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 2 transcripts (splice variants), 288 orthologues, 8 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101968.3	Plxna1-201	7188	1995aa	ENSRNOP00000092615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGW9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000137358.1	Plxna1-202	6759	1912aa	ENSRNOP00000099946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IB60 D3Z981	-

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Gene tree

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