Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Spdye4 ENSRNOG00000058563

.

Description

speedy/RINGO cell cycle regulator family member E4 [Source:RGD Symbol;Acc:1561076]

Gene Synonyms

MGC125213

Location

Primary_assembly 12: 16,450,868-16,458,327 forward strand.

GRCr8:CM070402.1

About this gene

This gene has 3 transcripts (splice variants), 187 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000119664.2	Spdye4-203	1771	268aa	ENSRNOP00000088064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4C0 A6K1M4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000080489.3	Spdye4-202	1733	231aa	ENSRNOP00000071196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3KR78	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000066744.5	Spdye4-201	678	173aa	ENSRNOP00000062723.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K1M3 D3ZEY3	-

.

Paralogues

.

.

Personal Data