Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc1a6 ENSRNOG00000007509

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Description

solute carrier family 1 member 6 [Source:RGD Symbol;Acc:620340]

Gene Synonyms

EAAT4, MGC114297

Location

Primary_assembly 7: 11,492,422-11,553,997 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 3 transcripts (splice variants), 198 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000165630.1	Slc1a6-203	2023	576aa	ENSRNOP00000100912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000108905.2	Slc1a6-202	2014	561aa	ENSRNOP00000096116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7TSX6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000009931.7	Slc1a6-201	2005	558aa	ENSRNOP00000009931.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LR26	-

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Paralogues

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