Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: Sec31b ENSRNOG00000025781

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Description

SEC31 homolog B, COPII coat complex component [Source:RGD Symbol;Acc:1598329]

Gene Synonyms

LOC309433

Location

Primary_assembly 1: 253,327,232-253,353,779 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 193 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000141870.1	Sec31b-202	4581	1164aa	ENSRNOP00000101165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000154301.1	Sec31b-203	4650	1134aa	ENSRNOP00000101532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000156785.1	Sec31b-204	4551	1101aa	ENSRNOP00000108280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000035758.7	Sec31b-201	4132	1125aa	ENSRNOP00000038038.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ADQ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data