Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pcgf5 ENSRNOG00000018532

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Description

polycomb group ring finger 5 [Source:RGD Symbol;Acc:1583513]

Gene Synonyms

LOC681178, MGC189388

Location

Primary_assembly 1: 243,476,261-243,587,869 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 210 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114275.2	Pcgf5-202	1726	253aa	ENSRNOP00000097432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000025020.8	Pcgf5-201	1710	236aa	ENSRNOP00000025020.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8YBC5 B2RZ90	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data