Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG6 ENSPNAG00000015480

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Description

SMG6 nonsense mediated mRNA decay factor [Ensembl NN prediction with score 99.97%]

Location

Primary_assembly 18: 39,640,039-39,665,181 reverse strand.

fPygNat1.pri:CM026738.1

About this gene

This gene has 5 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPNAT00000074383.1	SMG6-202	6512	1626aa	ENSPNAP00000075506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPNAT00000058532.1	SMG6-201	7246	1585aa	ENSPNAP00000042257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000016460.2	SMG6-205	4659	1552aa	ENSPNAP00000009931.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4CGC3	-
ENSPNAT00000047047.1	SMG6-203	4413	1470aa	ENSPNAP00000055561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000041502.1	SMG6-204	4326	1441aa	ENSPNAP00000057936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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