Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CSDE1 ENSPNAG00000001958

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Description

cold shock domain containing E1 [Ensembl NN prediction with score 100%]

Location

Primary_assembly 28: 25,247,059-25,263,483 reverse strand.

fPygNat1.pri:CM026748.1

About this gene

This gene has 10 transcripts (splice variants) and 242 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPNAT00000005075.2	CSDE1-208	3715	873aa	ENSPNAP00000005570.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4C3G6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPNAT00000005174.2	CSDE1-210	3766	842aa	ENSPNAP00000026410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4DSH1	-
ENSPNAT00000005186.2	CSDE1-209	3754	838aa	ENSPNAP00000005502.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4C0J9	-
ENSPNAT00000005104.2	CSDE1-207	3679	861aa	ENSPNAP00000005551.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4C3Y1	-
ENSPNAT00000005139.2	CSDE1-206	3667	857aa	ENSPNAP00000005528.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4C184	-
ENSPNAT00000068313.1	CSDE1-205	3562	822aa	ENSPNAP00000051677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000046522.1	CSDE1-204	2951	859aa	ENSPNAP00000042406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000082130.1	CSDE1-203	2873	833aa	ENSPNAP00000056247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000005233.2	CSDE1-202	2861	829aa	ENSPNAP00000005480.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4C388	-
ENSPNAT00000056086.1	CSDE1-201	2654	760aa	ENSPNAP00000076740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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