Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNJ1 ENSPANG00000022531

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Description

synaptojanin 1 [Source:NCBI gene (formerly Entrezgene);Acc:100137543]

Location

Primary_assembly 4: 168,203,991-168,302,844 reverse strand.

Panubis1.0:CM018183.1

About this gene

This gene has 10 transcripts (splice variants), 217 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPANT00000016036.4	SYNJ1-208	4845	1614aa	ENSPANP00000010251.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096NBU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPANT00000053315.2	SYNJ1-203	4971	1578aa	ENSPANP00000044420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3N8S8	-
ENSPANT00000071705.1	SYNJ1-204	4932	1565aa	ENSPANP00000050091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5NN00	-
ENSPANT00000066305.1	SYNJ1-202	4923	1562aa	ENSPANP00000054910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5NIB4	-
ENSPANT00000070296.1	SYNJ1-205	4884	1549aa	ENSPANP00000060769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5NTD3	-
ENSPANT00000076456.1	SYNJ1-201	4855	1603aa	ENSPANP00000053723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5NAI3	-
ENSPANT00000044192.2	SYNJ1-206	4807	1533aa	ENSPANP00000027465.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3LVH5	-
ENSPANT00000052226.2	SYNJ1-207	4591	1461aa	ENSPANP00000037763.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3MPP9	-
ENSPANT00000033212.2	SYNJ1-210	4173	1389aa	ENSPANP00000038897.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3MT38	-
ENSPANT00000016037.3	SYNJ1-209	4092	1306aa	ENSPANP00000006414.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096N272	-

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Summary

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