Transcript: ENSPTRT00000045405.4 KDM4C-202

Description

lysine demethylase 4C [Source:VGNC Symbol;Acc:VGNC:53283]

Location

About this transcript

This transcript has 21 exons, is annotated with 38 domains and features and maps to 541 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000045405.4	KDM4C-202	3171	1056aa	ENSPTRP00000042061.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R1B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000103737.1	KDM4C-201	2508	835aa	ENSPTRP00000085603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8T5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,171 bps, Translation length: 1,056 residues

Version

ENSPTRT00000045405.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.