Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CPSF1 ENSPTRG00000049288

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Description

cleavage and polyadenylation specific factor 1 [Source:UniProtKB Gene Name;Acc:A0A2I3RC63]

Location

Chromosome 8: 147,197,464-147,214,454 reverse strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 5 transcripts (splice variants), 193 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000107008.1	CPSF1-203	4329	1442aa	ENSPTRP00000075129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X1C2 K7DEQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000095708.1	CPSF1-204	4287	1428aa	ENSPTRP00000062235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RC63	-
ENSPTRT00000098943.1	CPSF1-201	651	216aa	ENSPTRP00000061942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RUA7	-
ENSPTRT00000105884.1	CPSF1-202	615	204aa	ENSPTRP00000075838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SG14 A0A6D2Y9E9	-
ENSPTRT00000077828.1	CPSF1-205	447	148aa	ENSPTRP00000085479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T9B6	-

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Summary

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