Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PABPC1 ENSPTRG00000047939

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Description

poly(A) binding protein cytoplasmic 1 [Source:VGNC Symbol;Acc:VGNC:57888]

Location

Chromosome 8: 102,576,629-102,595,806 reverse strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 3 transcripts (splice variants), 125 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000077415.1	PABPC1-201	2863	636aa	ENSPTRP00000069297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PMH3 A0A6D2WKU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000076559.1	PABPC1-203	1809	602aa	ENSPTRP00000073923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SAR4	-
ENSPTRT00000088667.1	PABPC1-202	918	305aa	ENSPTRP00000091710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TRW5	-

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Summary

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