Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ALKBH6 ENSPTRG00000039251

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Description

alkB homolog 6 [Source:VGNC Symbol;Acc:VGNC:10883]

Location

Chromosome 19: 37,950,490-37,955,621 reverse strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 3 transcripts (splice variants), 178 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000020151.5	ALKBH6-202	997	266aa	ENSPTRP00000018636.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WBE5 H2QG53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000088270.1	ALKBH6-201	1567	238aa	ENSPTRP00000093232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TW59 A0A6D2WJE5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000109522.1	ALKBH6-203	333	110aa	ENSPTRP00000093583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWL6 A0A6D2Y709	-

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Summary

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