Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DCTN1 ENSPTRG00000030450

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Description

dynactin subunit 1 [Source:VGNC Symbol;Acc:VGNC:216]

Location

Chromosome 2A: 75,846,821-75,866,032 reverse strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 7 transcripts (splice variants), 266 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000022474.5	DCTN1-201	4494	1278aa	ENSPTRP00000020737.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QI59	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000078283.1	DCTN1-202	4424	1253aa	ENSPTRP00000074892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7C257	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000099843.1	DCTN1-204	3816	1271aa	ENSPTRP00000071859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5M0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000089240.1	DCTN1-205	3795	1264aa	ENSPTRP00000074707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SDY3	-
ENSPTRT00000090683.1	DCTN1-206	3738	1245aa	ENSPTRP00000064739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RJB6	-
ENSPTRT00000083653.1	DCTN1-207	3726	1241aa	ENSPTRP00000069375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RXC9	-
ENSPTRT00000100494.1	DCTN1-203	3396	1131aa	ENSPTRP00000092706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TU04	-

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Summary

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