Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STOML2 ENSPTRG00000020903

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Description

stomatin like 2 [Source:VGNC Symbol;Acc:VGNC:8938]

Location

Chromosome 9: 35,903,186-35,906,486 reverse strand.

Pan_tro_3.0:CM000323.3

About this gene

This gene has 5 transcripts (splice variants), 218 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000088150.1	STOML2-201	1311	361aa	ENSPTRP00000087492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TF51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000038675.3	STOML2-205	1050	349aa	ENSPTRP00000035756.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QX79	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000083515.1	STOML2-202	936	311aa	ENSPTRP00000063498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RFT8 A0A6D2Y5Y8	-
ENSPTRT00000111213.1	STOML2-203	933	310aa	ENSPTRP00000080262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3STI3 A0A6D2VU90	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000098705.1	STOML2-204	915	304aa	ENSPTRP00000071126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2Q6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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