Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCRIB ENSPTRG00000020669

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Description

scribble planar cell polarity protein [Source:UniProtKB Gene Name;Acc:H2QWV0]

Location

Chromosome 8: 146,569,900-146,596,007 reverse strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 5 transcripts (splice variants), 184 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000084278.1	SCRIB-201	4989	1662aa	ENSPTRP00000093223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WB74 K7AG48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000087340.1	SCRIB-202	4962	1653aa	ENSPTRP00000071172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2F3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000084498.1	SCRIB-203	4920	1639aa	ENSPTRP00000079539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SRF7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000038228.4	SCRIB-204	4914	1637aa	ENSPTRP00000035343.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X4D7 H2QWV0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000078417.1	SCRIB-205	4887	1628aa	ENSPTRP00000084000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T456	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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