Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UTP23 ENSPTRG00000020521

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Description

UTP23 small subunit processome component [Source:VGNC Symbol;Acc:VGNC:8185]

Location

Chromosome 8: 118,979,455-119,061,853 forward strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 4 transcripts (splice variants), 211 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000037975.3	UTP23-201	3681	269aa	ENSPTRP00000035101.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QWL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000089760.1	UTP23-203	318	105aa	ENSPTRP00000083160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T1Q1 A0A6D2WDM3	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000092955.1	UTP23-202	225	74aa	ENSPTRP00000066026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RMU3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000094753.1	UTP23-204	195	64aa	ENSPTRP00000092995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUN6 A0A6D2WZ68	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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