Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SDCBP ENSPTRG00000020277

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Description

syndecan binding protein [Source:VGNC Symbol;Acc:VGNC:800]

Location

Chromosome 8: 59,560,212-59,590,101 forward strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 5 transcripts (splice variants), 181 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000087404.1	SDCBP-203	990	324aa	ENSPTRP00000063940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RH06	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000102101.1	SDCBP-202	4681	318aa	ENSPTRP00000089267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8KHJ0 A0A6D2W8C2	-
ENSPTRT00000037559.7	SDCBP-201	2128	298aa	ENSPTRP00000034713.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WRI0 G2HGC6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000080070.1	SDCBP-205	894	297aa	ENSPTRP00000089919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TLZ3	-
ENSPTRT00000083006.1	SDCBP-204	735	244aa	ENSPTRP00000062684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RDD5 A0A6D2XME1	-

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Summary

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