Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
- Paralogues
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Genetic Variation
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Gene: ATP6V1H ENSPTRG00000020249

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Description

ATPase H+ transporting V1 subunit H [Source:VGNC Symbol;Acc:VGNC:7588]

Location

Chromosome 8: 54,674,943-54,796,748 reverse strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 3 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000093059.1	ATP6V1H-202	2422	483aa	ENSPTRP00000077715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y9Z1 K7CGT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000037519.5	ATP6V1H-201	2126	465aa	ENSPTRP00000034674.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WLZ2 H2QW58	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000080198.1	ATP6V1H-203	1287	428aa	ENSPTRP00000087626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TFI5	-

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Summary

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