Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TNPO3 ENSPTRG00000019676

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Description

transportin 3 [Source:VGNC Symbol;Acc:VGNC:4545]

Location

Chromosome 7: 133,474,134-133,574,829 reverse strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 4 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000036454.6	TNPO3-202	4406	923aa	ENSPTRP00000033702.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2YCP5 K7CND3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000077325.1	TNPO3-201	4567	857aa	ENSPTRP00000067029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RQS6 A0A6D2VT40	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000082566.1	TNPO3-204	2733	910aa	ENSPTRP00000064478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RIG7	-
ENSPTRT00000106638.1	TNPO3-203	2580	859aa	ENSPTRP00000088353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TGK6 A0A6D2XSH8	-

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Summary

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