Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STX1A ENSPTRG00000019277

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Description

syntaxin 1A [Source:VGNC Symbol;Acc:VGNC:4525]

Location

Chromosome 7: 75,549,791-75,570,292 forward strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 2 transcripts (splice variants), 200 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000035645.5	STX1A-201	2150	288aa	ENSPTRP00000032951.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XW76 H2QUQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000108703.1	STX1A-202	843	280aa	ENSPTRP00000083709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3A7 A0A6D2X9P4	-

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Summary

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