Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM5 ENSPTRG00000019057

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Description

LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:4420]

Location

Chromosome 7: 31,638,582-31,643,435 reverse strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000035229.6	LSM5-201	2026	91aa	ENSPTRP00000032568.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WDX8 K7CM58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000106610.1	LSM5-202	264	87aa	ENSPTRP00000084190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RPV2	-

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Summary

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