Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STXBP5 ENSPTRG00000018687

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Description

syntaxin binding protein 5 [Source:VGNC Symbol;Acc:VGNC:7931]

Location

Chromosome 6: 151,272,623-151,458,506 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 5 transcripts (splice variants), 288 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000034504.6	STXBP5-201	9435	1152aa	ENSPTRP00000031893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XQJ6 H2QTV9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000080990.1	STXBP5-202	9326	1116aa	ENSPTRP00000080570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VS86 K7DFR0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000081322.1	STXBP5-204	3408	1135aa	ENSPTRP00000061849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBQ0	-
ENSPTRT00000087712.1	STXBP5-205	3300	1099aa	ENSPTRP00000069338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RX98 A0A6D2VW19	-
ENSPTRT00000082763.1	STXBP5-203	930	309aa	ENSPTRP00000090610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TN00 A0A6D2WB08	-

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Summary

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